Recent Publications

ZORA Publication List

Publications

• Journal Article

  • 2025

    • Bhandary, Subhrajyoti; Ryan, Tara; Rao, Pavan Sreenivasa; O'Dowd, Noel; Linden, Anthony; Kaczmarek, Anna M; Guerin, Sarah; Van Hecke, Kristof (2025). Elusive Interplay of 3D Structural Similarity and Twinning in Mechanical Flexibility of Luminescent Organic Crystals. Small, 21(19):2501145.
    • Linden, Anthony; Egli, Daniel H; Heimgartner, Heinz (2025). Transformations of thiocarbonyls into alkenes $via$ Barton–Kellogg olefination. Acta Crystallographica. Section C, Structural Chemistry, 81(4):238-245.
    • García-Raso, Ángel; Terrón, Ángel; Fiol, Juan J; López-Zafra, Adela; Herreros, Marino; Capilla, Inés; Domínguez, Miguel A; Barceló-Oliver, Miquel; Spingler, Bernhard; Frontera, Antonio (2025). Synthesis, X-ray characterization, and DFT study of six deferiprone analogues. Journal of Molecular Structure THEOCHEM, 1326:141123.
    • Park, Shinyoung; Lee, Joo-Yeon; Park, Jin-Young; Song, Young Woo; Cha, Jae-Kook; Strauss, Franz J; Shin, Seung-Yun; Lim, Hyun-Chang; Jung, Ronald E; Jung, Ui-Won; Thoma, Daniel S (2025). Ridge Augmentation Using a Self-Retaining Block Bone Material in Damaged Extraction Sockets: A Multi-Centre Randomized Controlled Clinical Trial. Journal of Clinical Periodontology, 52(4):599-611.
    • Kręcijasz, Remigiusz B; Malinčík, Juraj; Mathew, Simon; Štacko, Peter; Šolomek, Tomáš (2025). Strain-Induced Photochemical Opening of Ferrocene[6]cycloparaphenylene: Uncaging of Fe$^{2+}$ with Green Light. Journal of the American Chemical Society, 147(12):10231-10237.
    • Augustinowitz, Till; Schiavon, Lucia; Mücke, Katharina; Schwarz-Herzke, Beryl; Drescher, Dieter; Brunello, Giulia; Becker, Kathrin (2025). Is simultaneous placement of orthodontic mini-implants and skeletally anchored appliances advisable? : CBCT-based cadaver study comparing the accuracy of the digital workflow with methods requiring two visits. Journal of Orofacial Orthopedics / Fortschritte der Kieferorthopädie:Epub ahead of print.
    • Ioannidis, Alexis; Pitta, João; Panadero, Rubén Agustín; Chantler, Jennifer G M; Villar, Sandra Fernández; Fonseca, Manrique; Lozano, Jaime Gil; Hämmerle, Christoph H F; Hey, Jeremias; Karasan, Duygu; Kraljevic, Iris; Mainjot, Amélie; Pachiou, Aspasia; Rutten, Patrick; von Stein-Lausnitz, Manja; Strasding, Malin; Zaugg, Lucia K (2025). Rehabilitation Strategies and Occlusal Vertical Dimension Considerations in the Management of Worn Dentitions: Consensus Statement From SSRD, SEPES, and PROSEC Conference on Minimally Invasive Restorations. Journal of Esthetic and Restorative Dentistry, 37(3):702-706.
    • Guérin, Amandine; Levasseur, Caroline; Herger, Aline; Renggli, Dominik; Sotiropoulos, Alexandros Georgios; Kadler, Gabor; Hou, Xiaoyu; Schaufelberger, Myriam; Meyer, Christian; Wicker, Thomas; Bigler, Laurent; Ringli, Christoph (2025). Histidine limitation alters plant development and influences the TOR network. Journal of Experimental Botany, 76(4):1085-1098.
    • Helfenstein, Isabelle S; Sturm, Joan T; Schmid, Bernhard; Damm, Alexander; Schuman, Meredith Christine; Morsdorf, Felix (2025). Satellite observations reveal a positive relationship between trait‐based diversity and drought response in temperate forests. Global Change Biology, 31(2):e70059.
    • Guo, Man; Dongfang, Nanchen; Liu, Qiang; Iannuzzi, Marcella; van Bokhoven, Jeroen Anton; Artiglia, Luca (2025). Reaction Intermediates Involved in the Epoxidation of Ethylene Over Silver Revealed by In Situ Photoelectron Spectroscopy. Small, 21(5):e2408432.
    • Pirc, Miha; Mancini, Leonardo; Müller, Nicolas; Lim, Hyun-Chang; Jung, Ronald E; Thoma, Daniel S; Bienz, Stefan P (2025). Association of flap tension with flap design and graft volume in soft tissue augmentation: a cadaveric study in pigs. Journal of Periodontal & Implant Science, 55:e8.
    • Bunzen, Hana; Sertcan Gökmen, Beliz; Kalytta‐Mewes, Andreas; Grzywa, Maciej; Wojciechowski, Jakub; Hutter, Jürg; Hehn, Anna‐Sophia; Volkmer, Dirk (2025). Experimental and Theoretical Insights on Gas Trapping of Noble Gases in MFU‐4‐Type Metal–Organic Frameworks. Chemistry, 31(5):e202403574.
    • Zhao, Yonggui; Dongfang, Nanchen; Huang, Chong; Erni, Rolf; Li, Jingguo; Zhao, Han; Pan, Long; Iannuzzi, Marcella; Patzke, Greta R (2025). Operando monitoring of the functional role of tetrahedral cobalt centers for the oxygen evolution reaction. Nature Communications, 16(1):580.
    • Roithmeyer, Helena; Bühler, Jan; Blacque, Olivier; Tuncay, Isik; Moehl, Thomas; Invernizzi, Cristiano; Keller, Florian; Iannuzzi, Marcella; Tilley, S David (2025). The Swiss Army Knife of Electrodes: Pillar[6]arene‐Modified Electrodes for Molecular Electrocatalysis Over a Wide pH Range. Angewandte Chemie Internationale Edition, 64(1):e202413144.
    • Andersson, Linnéa; Sprik, Michiel; Hutter, Jürg; Zhang, Chao (2025). Electronic Response and Charge Inversion at Polarized Gold Electrode. Angewandte Chemie Internationale Edition, 64(1):e202413614.
    • Csucker, Joshua; Grundmann, Nora Sophie; Blacque, Olivier; Spingler, Bernhard; Alberto, Roger (2025). The role of $\left[\text{Re}(\eta^6\text{-arene})_2\right]^+$ substituents in electro- and photocatalytic water reduction with $\left[\text{Co}(\text{terpy})_2\right]^{3+}$ catalysts. Catalysis Science & Technology, 15(5):1627-1633.
    • Janeková, Hana; Fisher, Sergey; Šolomek, Tomáš; Štacko, Peter (2025). Surfing the limits of cyanine photocages one step at a time. Chemical Science, 16(4):1677-1683.
    • Kurath, Dave; van Moorsel, Sofia J; Klaver, Jolanda; Voortman, Tis; Siegfried, Barbara; Brügger, Yves-Alain; Moradi, Abobakr; Czyż, Ewa A; de La Harpe, Marylaure; Wiesenberg, Guido L B; Schaepman, Michael E; Schuman, Meredith C (2025). Leaf spectroscopy reveals drought response variation in Fagus sylvatica saplings from across the species’ range. Journal of Geophysical Research: Biogeosciences, 130(2):e2024JG008404.

  • 2024

    • Patzke, Greta R; Keller, Florian; Iannuzzi, Marcella; Reith, Lukas; Marshall, Kenneth Paul; van Beek, Wouter; Triana, Carlos A (2024). Structure-Selection Dynamics of Cobalt Nanoparticles from Solution Synthesis and Their Impact on the Oxygen Evolution Reaction. ACS Nano, 18(52):35533-35549.
    • Ren, Jiajun; Mathew, Anugraha; Rodríguez-García, María; Kohler, Tobias; Blacque, Olivier; Linden, Anthony; Eberl, Leo; Sieber, Simon; Gademann, Karl (2024). Functional biosynthetic stereodivergence in a gene cluster via a dihydrosydnone N-oxide. Communications Chemistry, 7(1):301.
    • Battaglia, Stefano; Rossmannek, Max; Rybkin, Vladimir V; Tavernelli, Ivano; Hutter, Jürg (2024). A general framework for active space embedding methods with applications in quantum computing. npj Computational Materials, 10(1):297.
    • Chen, Kangwei; Xu, Jie; Laroche, Alexandre; Lau, Yuen-Yee; Seeger, Stefan (2024). Heterogeneous Silicone Nanorods with Region-Specific Functionality. ACS applied materials & interfaces, 16(50):69713-69724.
    • Bürgisser, Héloïse; Williams, Elyse T; Jeandin, Aliénor; Lescure, Robin; Premanand, Adhvitha; Wang, Songlin; Hartrampf, Nina (2024). A Versatile “Synthesis Tag” (SynTag) for the Chemical Synthesis of Aggregating Peptides and Proteins. Journal of the American Chemical Society, 146(50):34887-34899.
    • Vollenweider, Vera; Rehm, Karoline; Chepkirui, Clara; Pérez-Berlanga, Manuela; Polymenidou, Magdalini; Piel, Jörn; Bigler, Laurent; Kümmerli, Rolf (2024). Antimicrobial activity of iron-depriving pyoverdines against human opportunistic pathogens. eLife, 13:RP92493.
    • Steiner, Till; Schanbacher, Franziska; Lorenzen, Wolfram; Enke, Heike; Janssen, Elisabeth M L; Niedermeyer, Timo H J; Gademann, Karl (2024). UV–vis absorbance spectra, molar extinction coefficients and circular dichroism spectra for the two cyanobacterial metabolites anabaenopeptin A and anabaenopeptin B. Data in brief, 57:110914.
    • Chesnokov, Gleb A; Friedli, Julia; Carta, Francis J; Gademann, Karl (2024). Total Synthesis of (−)-Bipolarolide D. JACS Au, 4(11):4194-4198.
    • Gruber, Christoph; Pupeikis, Justinas; Camenzind, Sandro L; Willenberg, Benjamin; Camargo, Franco V A; Lang, Lukas; Hamm, Peter; Rampur, Anupamaa; Heidt, Alexander; Phillips, Christopher R; Cerullo, Giulio; Keller, Ursula (2024). High-sensitivity pump-probe spectroscopy with a dual-comb laser and a PM-Andi supercontinuum. Optics letters, 49(22):6445.
    • Tian, Run; Posselt, Malte; Fenner, Kathrin; McLachlan, Michael S (2024). Variability of Biodegradation Rates of Commercial Chemicals in Rivers in Different Regions of Europe. Environmental Science & Technology, 58(45):20201-20210.
    • Töpfer, Kai; Boittier, Eric; Devereux, Mike; Pasti, Andrea; Hamm, Peter; Meuwly, Markus (2024). Force Fields for Deep Eutectic Mixtures: Application to Structure, Thermodynamics and 2D-Infrared Spectroscopy. Journal of Physical Chemistry B, 128(44):10937-10949.
    • Service, Erin; Moehl, Thomas; Tilley, S David (2024). Operation of Amorphous TiO$_2$-Protected Photocathodes Described with the Maxwell Equivalent Circuit. ACS applied materials & interfaces, 16(44):60084-60093.
    • Bae, Sanghyun; Moehl, Thomas; Service, Erin; Kim, Minjung; Adams, Pardis; Wang, Zhenbin; Choi, Yuri; Ryu, Jungki; Tilley, S David (2024). A hole-selective hybrid TiO$_2$ layer for stable and low-cost photoanodes in solar water oxidation. Nature Communications, 15(1):9439.
    • Seller-Brison, Carolin; Brison, Antoine; Yu, Yaochun; Robinson, Serina L; Fenner, Kathrin (2024). Adaptation towards catabolic biodegradation of trace organic contaminants in activated sludge. Water research, 266:122431.
    • Mukiza, Janvier; Habarurema, Gratien; Sezirahiga, Jurdas; Mukabagorora, Theonille; Nkuranga, Jean Bosco; Uwambajineza, Tite; Muyizere, Theoneste; Blacque, Olivier; Baziga, Gervais (2024). Aqua-complexes of pyrimidine-4,6-dicarboxylic acid and its monoester with organometallic fac-[M(CO)3]+ (M = Re and 99mTc) core as radiopharmaceutical probes: Synthesis and characterization. Journal of Organometallic Chemistry, 1021:123348.
    • Al-Wahaibi, Lamya H; Gudimetla, Seetha Rama Sastry; Blacque, Olivier; El-Emam, Ali A; Percino, M Judith; Thamotharan, Subbiah (2024). Interplay of weak noncovalent interactions in (E)-4-chloro-N’-(thiophen-2-ylmethylene)benzohydrazide: Insights from Hirshfeld surface, PIXEL energy and QTAIM analyses. Journal of Molecular Structure THEOCHEM, 1315:138822.
    • Juríček, Michal (2024). Hack Your Chemistry. Chimia, 78(10):677-681.
    • Tang, Deqi; Ketkaew, Rangsiman; Luber, Sandra (2024). Machine Learning Interatomic Potentials for Heterogeneous Catalysis. Chemistry, 30(60):e202401148.
    • Lang, Jakob; Ramos, Sergio E; Reichert, Linus; Amboka, Grace M; Apel, Celina; Chidawanyika, Frank; Detebo, Andargachew; Librán-Embid, Felipe; Meinhof, David; Bigler, Laurent; Schuman, Meredith C (2024). Push–Pull Intercropping Increases the Antiherbivore Benzoxazinoid Glycoside Content in Maize Leaf Tissue. ACS Agricultural Science & Technology, 4(10):1074-1082.
    • Ahunbay, Esra; Fazliji, Besim; Maloku, Besa; Sivanantharasa, Nirusan; Sigel, Roland K O; Zelger-Paulus, Susann (2024). Fluorescent End-Labeling and Encapsulation of Long RNAs for Single-Molecule FRET-TIRF Microscopy. Journal of Visualized Experiments, (212):e67391.
    • Jeong, Seungwoo; Schütz, Vadim; Demir, Fatih; Preusche, Matthias; Huesgen, Pitter; Bigler, Laurent; Kovacic, Filip; Gutbrod, Katharina; Dörmann, Peter; Schulz, Margot (2024). Cyclic Isothiocyanate Goitrin Impairs Lotus japonicus Nodulation, Affects the Proteomes of Nodules and Free Mesorhizobium loti, and Induces the Formation of Caffeic Acid Derivatives in Bacterial Cultures. Plants, 13(20):2897.
    • Schreder, Lukas; Luber, Sandra (2024). Implementation of frozen density embedding in CP2K and OpenMolcas: CASSCF wavefunctions embedded in a Gaussian and plane wave DFT environment. Journal of Chemical Physics, 161(14):144110.
    • Sertcan Gökmen, Beliz; Hutter, Jürg; Hehn, Anna-Sophia (2024). Excited-State Forces with the Gaussian and Augmented Plane Wave Method for the Tamm–Dancoff Approximation of Time-Dependent Density Functional Theory. Journal of Chemical Theory and Computation, 20(19):8494-8504.
    • Mousavi, Seyyed Jabbar; Biggs, Megan F; Johnson, Jeremy A; Hamm, Peter; Shalit, Andrey (2024). $\chi^{(2)}$-induced artifact overwhelming the third-order signal in 2D Raman–THz spectroscopy of non-centrosymmetric materials. Journal of Chemical Physics, 161(13):134502.
    • Gu, Shaohua; Shao, Yuanzhe; Rehm, Karoline; Bigler, Laurent; Zhang, Di; He, Ruolin; Xu, Ruichen; Shao, Jiqi; Jousset, Alexandre; Friman, Ville-Petri; Bian, Xiaoying; Wei, Zhong; Kümmerli, Rolf; Li, Zhiyuan (2024). Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways. eLife, 13:RP96719.
    • El Atrassi, Zakaria; Benzekri, Zakaria; Blacque, Olivier; Hökelek, Tuncer; Mazzah, Ahmed; Cherkaoui, Hassan; Sebbar, Nada Kheira (2024). Crystal structure, Hirshfeld surface analysis, and calculations of intermolecular interaction energies and energy frameworks of 1-[(1-hexyl-1$H$-1,2,3-triazol-4-yl)methyl]-3-(1-methylethenyl)-benzimidazol-2-one. Acta Crystallographica Section E: Crystallographic Communications, 80(10):1075-1080.
    • Sghyar, Riham; Lahyaoui, Mouad; El Ibrahimi, Brahim; Blacque, Olivier; Kartah, Badr Eddine; Ez-zoubi, Amine; Hökelek, Tuncer; Mague, Joel T; EL Hadrami, El Mestafa; Ben-Tama, Abdeslem; Sebbar, Nada Kheira (2024). Newly synthesized based Schiff of phenylferrocene: Molecular and crystal structures, Density Functional Theory calculations, Hirshfeld surface analyses, and improved molecular docking data. Journal of Molecular Structure THEOCHEM, 1314:138747.
    • Li, Shangkun; Zhang, Zeyi; Marks, Walker R; Huang, Xinan; Chen, Hang; Stoian, Dragos C; Erni, Rolf; Triana, Carlos A; Patzke, Greta R (2024). {Co4O4} Cubanes in a conducting polymer matrix as bio-inspired molecular oxygen evolution catalysts. Nature Communications, 15(1):8432.
    • Oppelt, Kerstin T; Hamm, Peter (2024). FullThrOTTLE-TrIR: Time-Resolved IR Spectroscopy of Electrochemically Generated Species Using a Full Throughput Optically Transparent Thin-Layer Electrochemical Cell. Journal of Physical Chemistry C, 128(38):16040-16049.
    • Gäding, J; Della Balda, V; Lan, J; Konrad, J; Iannuzzi, M; Meißner, R H; Tocci, G (2024). The role of the water contact layer on hydration and transport at solid/liquid interfaces. Proceedings of the National Academy of Sciences of the United States of America, 121(38):e2407877121.
    • Chai, Ziwei; Luber, Sandra (2024). Grand Canonical Ensemble Approaches in CP2K for Modeling Electrochemistry at Constant Electrode Potentials. Journal of Chemical Theory and Computation:Epub ahead of print.
    • Attrah, Mustafa; Schärer, Milo R; Esposito, Mauro; Gionchetta, Giulia; Bürgmann, Helmut; Lens, Piet N L; Fenner, Kathrin; van de Vossenberg, Jack; Robinson, Serina L (2024). Disentangling abiotic and biotic effects of treated wastewater on stream biofilm resistomes enables the discovery of a new planctomycete beta-lactamase. Microbiome, 12(1):164.

Pagination